Sequence Similarity Clusters for the Entities in PDB 1AKT

Entity #1 | Chains: A
FLAVODOXIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 18 2721
95 % 16 29 1815 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 16 29 1854
70 % 16 29 1868
50 % 17 30 1797
40 % 17 35 1078
30 % 29 61 723

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures