Sequence Similarity Clusters for the Entities in PDB 1AKS

Entity #1 | Chains: A
ALPHA TRYPSIN protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 45010
95 % 1 2 33753
90 % 1 2 32277
70 % 1 2 28796
50 % 1 2 24602
40 % 15 42 1139
30 % 16 50 972
Entity #2 | Chains: B
ALPHA TRYPSIN protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 46606
95 % 2 3 24162
90 % 2 3 23389
70 % 2 3 21307
50 % 16 43 1105
40 % 17 52 975
30 % 17 52 946

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.