Sequence Similarity Clusters for the Entities in PDB 1AKM

Entity #1 | Chains: A,B,C
ORNITHINE TRANSCARBAMYLASE protein, length: 333 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 11755
95 % 3 3 4290 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 3 3 4316
70 % 3 3 4237
50 % 13 14 1011
40 % 35 38 437
30 % 133 142 137

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.