Sequence Similarity Clusters for the Entities in PDB 1AJ9

Entity #1 | Chains: A
HEMOGLOBIN (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 65627
95 % 116 245 19 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 117 246 21
70 % 142 327 15
50 % 344 744 4
40 % 349 749 8
30 % 748 1198 8
Entity #2 | Chains: B
HEMOGLOBIN (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 75 164 50
95 % 124 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 127 250 19
70 % 157 341 12
50 % 345 744 4
40 % 350 749 8
30 % 749 1198 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.