Sequence Similarity Clusters for the Entities in PDB 1AJ7

Entity #1 | Chains: L
IMMUNOGLOBULIN 48G7 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40803
95 % 8 9 7804 Flexibility: Low
Max RMSD: 6.1, Avg RMSD: 3.0
PDBFlex
90 % 222 720 3
70 % 744 2327 1
50 % 1524 4713 1
40 % 1524 4713 1
30 % 1712 5567 1
Entity #2 | Chains: H
IMMUNOGLOBULIN 48G7 FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40533
95 % 3 4 18416 Flexibility: Medium
Max RMSD: 5.4, Avg RMSD: 3.9
PDBFlex
90 % 3 4 17991
70 % 736 2280 2
50 % 1525 4713 1
40 % 1525 4713 1
30 % 1713 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.