Sequence Similarity Clusters for the Entities in PDB 1AJ5

Entity #1 | Chains: A,B
CALPAIN protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 13368
95 % 3 6 9557 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.7
PDBFlex
90 % 15 21 1670
70 % 15 21 1689
50 % 15 22 1549
40 % 15 22 1566
30 % 29 46 589

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures