Sequence Similarity Clusters for the Entities in PDB 1AIH

Entity #1 | Chains: A,B,C,D
HP1 INTEGRASE protein, length: 170 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23066
95 % 1 1 19859 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.1
PDBFlex
90 % 1 1 19316
70 % 1 1 17830
50 % 1 1 15461
40 % 1 1 13746
30 % 1 1 11762

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures