Sequence Similarity Clusters for the Entities in PDB 1AIG

Entity #1 | Chains: L,N
PHOTOSYNTHETIC REACTION CENTER (L SUBUNIT) protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 42 68 330
95 % 51 96 319
90 % 51 96 343
70 % 51 96 379
50 % 67 120 327
40 % 67 120 353
30 % 67 120 358
Entity #2 | Chains: M,O
PHOTOSYNTHETIC REACTION CENTER (M SUBUNIT) protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 61 407
95 % 51 96 318
90 % 51 96 341
70 % 51 96 378
50 % 67 120 326
40 % 67 120 351
30 % 67 120 357
Entity #3 | Chains: H,P
PHOTOSYNTHETIC REACTION CENTER (H SUBUNIT) protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 95 228
95 % 51 96 321
90 % 51 96 344
70 % 51 96 380
50 % 51 96 438
40 % 67 120 354
30 % 67 120 359

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.