Sequence Similarity Clusters for the Entities in PDB 1AIF

Entity #1 | Chains: A,L
ANTI-IDIOTYPIC FAB 409.5.3 (IGG2A) FAB (LIGHT CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26460
95 % 3 3 17621
90 % 77 145 139
70 % 1355 1803 2
50 % 3291 4435 1
40 % 3291 4435 1
30 % 3872 5225 1
Entity #2 | Chains: B,H
ANTI-IDIOTYPIC FAB 409.5.3 (IGG2A) FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26383
95 % 2 2 21988
90 % 2 2 21330
70 % 1589 2145 1
50 % 3292 4435 1
40 % 3292 4435 1
30 % 3873 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.