Sequence Similarity Clusters for the Entities in PDB 1AI8

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 107 331 44
95 % 107 332 60
90 % 107 332 65
70 % 107 334 77
50 % 107 334 101
40 % 107 334 125
30 % 107 334 137
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 94 286 55
95 % 111 370 36
90 % 111 377 38
70 % 111 401 44
50 % 111 401 78
40 % 697 1635 4
30 % 737 1777 6
Entity #3 | Chains: I
HIRUDIN IIIB protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.