Sequence Similarity Clusters for the Entities in PDB 1AI8

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 111 335 45
95 % 111 336 60
90 % 111 336 65
70 % 111 338 76
50 % 111 338 101
40 % 111 338 125
30 % 111 338 137
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 98 290 55
95 % 115 374 35
90 % 115 381 38
70 % 115 405 44
50 % 115 405 78
40 % 727 1684 4
30 % 767 1833 6
Entity #3 | Chains: I
HIRUDIN IIIB protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.