Sequence Similarity Clusters for the Entities in PDB 1AI6

Entity #1 | Chains: A
PENICILLIN AMIDOHYDROLASE protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 20 2589
95 % 18 21 3024
90 % 18 21 3072
70 % 18 21 3045
50 % 18 22 2863
40 % 18 22 2813
30 % 18 22 2637
Entity #2 | Chains: B
PENICILLIN AMIDOHYDROLASE protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 10288
95 % 21 24 2467 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 21 24 2532
70 % 21 26 1799
50 % 21 27 1782
40 % 21 29 1680
30 % 21 29 1652

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures