Sequence Similarity Clusters for the Entities in PDB 1AI1

Entity #1 | Chains: L
IGG1-KAPPA 59.1 FAB (LIGHT CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 38867
95 % 21 34 909
90 % 47 78 268
70 % 1266 1790 2
50 % 3089 4403 1
40 % 3089 4403 1
30 % 3616 5191 1
Entity #2 | Chains: H
IGG1-KAPPA 59.1 FAB (HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 38302
95 % 1 2 29345
90 % 1 2 28264
70 % 1490 2129 1
50 % 3090 4403 1
40 % 3090 4403 1
30 % 3617 5191 1
Entity #3 | Chains: P
AIB142 protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 9481
95 % 5 6 9531
90 % 5 6 9417
70 % 13 15 2869
50 % 13 15 2822
40 % 13 15 2796
30 % 13 15 2618

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.