Sequence Similarity Clusters for the Entities in PDB 1AI1

Entity #1 | Chains: L
IGG1-KAPPA 59.1 FAB (LIGHT CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 40174
95 % 26 39 762
90 % 55 99 152
70 % 1576 2280 1
50 % 3197 4619 1
40 % 3197 4619 1
30 % 3748 5440 1
Entity #2 | Chains: H
IGG1-KAPPA 59.1 FAB (HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39596
95 % 1 2 30330
90 % 1 2 29187
70 % 1544 2238 2
50 % 3198 4619 1
40 % 3198 4619 1
30 % 3749 5440 1
Entity #3 | Chains: P
AIB142 protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 9826
95 % 5 6 9896
90 % 5 6 9786
70 % 13 15 2969
50 % 13 15 2924
40 % 13 15 2885
30 % 13 15 2700

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.