Sequence Similarity Clusters for the Entities in PDB 1AHW

Entity #1 | Chains: A,D
IMMUNOGLOBULIN FAB 5G9 (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 27405
95 % 3 3 18260
90 % 19 26 2101
70 % 1733 2280 1
50 % 3517 4619 1
40 % 3517 4619 1
30 % 4149 5440 1
Entity #2 | Chains: B,E
IMMUNOGLOBULIN FAB 5G9 (HEAVY CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 27406
95 % 3 3 18206
90 % 18 18 1802
70 % 1701 2238 2
50 % 3518 4619 1
40 % 3518 4619 1
30 % 4150 5440 1
Entity #3 | Chains: C,F
TISSUE FACTOR protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 39 928
95 % 39 40 1224
90 % 39 40 1254
70 % 40 41 1223
50 % 40 41 1279
40 % 40 41 1296
30 % 40 41 1270

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.