Sequence Similarity Clusters for the Entities in PDB 1AHW

Entity #1 | Chains: A,D
IMMUNOGLOBULIN FAB 5G9 (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26488
95 % 3 3 17651
90 % 18 25 2205
70 % 1411 1803 2
50 % 3422 4435 1
40 % 3422 4435 1
30 % 4030 5225 1
Entity #2 | Chains: B,E
IMMUNOGLOBULIN FAB 5G9 (HEAVY CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26489
95 % 3 3 17599
90 % 18 18 1731
70 % 1653 2145 1
50 % 3423 4435 1
40 % 3423 4435 1
30 % 4031 5225 1
Entity #3 | Chains: C,F
TISSUE FACTOR protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 38 928
95 % 38 39 1223
90 % 38 39 1253
70 % 39 40 1218
50 % 39 40 1263
40 % 39 40 1279
30 % 39 40 1252

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.