Sequence Similarity Clusters for the Entities in PDB 1AHS

Entity #1 | Chains: A,B,C
AFRICAN HORSE SICKNESS VIRUS (SEROTYPE 4) VP7 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27508
95 % 1 1 24122 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 23336
70 % 1 1 21233
50 % 1 1 18266
40 % 1 1 16155
30 % 1 1 13537

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures