Sequence Similarity Clusters for the Entities in PDB 1AHJ

Entity #1 | Chains: A,C,E,G
NITRILE HYDRATASE (SUBUNIT ALPHA) protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 14 3535
95 % 28 28 1804 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 28 28 1845
70 % 28 28 1853
50 % 37 37 659
40 % 46 46 522
30 % 46 46 520
Entity #2 | Chains: B,D,F,H
NITRILE HYDRATASE (SUBUNIT BETA) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 28 28 1521
95 % 28 28 1796 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 28 28 1837
70 % 28 28 1854
50 % 28 28 1890
40 % 32 32 950
30 % 50 50 606

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures