Sequence Similarity Clusters for the Entities in PDB 1AHJ

Entity #1 | Chains: A,C,E,G
NITRILE HYDRATASE (SUBUNIT ALPHA) protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22373
95 % 28 28 1835 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 28 28 1875
70 % 28 28 1887
50 % 40 40 625
40 % 46 46 511
30 % 46 46 502
Entity #2 | Chains: B,D,F,H
NITRILE HYDRATASE (SUBUNIT BETA) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22249
95 % 28 28 1832 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 28 28 1872
70 % 28 28 1885
50 % 28 28 1916
40 % 32 32 947
30 % 50 50 588

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures