Sequence Similarity Clusters for the Entities in PDB 1AHJ

Entity #1 | Chains: A,C,E,G
NITRILE HYDRATASE (SUBUNIT ALPHA) protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21825
95 % 28 28 1763 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 28 28 1806
70 % 28 28 1827
50 % 40 40 613
40 % 46 46 496
30 % 46 46 495
Entity #2 | Chains: B,D,F,H
NITRILE HYDRATASE (SUBUNIT BETA) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21701
95 % 28 28 1760 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 28 28 1803
70 % 28 28 1825
50 % 28 28 1867
40 % 32 32 932
30 % 50 50 579

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures