Sequence Similarity Clusters for the Entities in PDB 1AGF

Entity #1 | Chains: A
B*0801 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 16 1969
95 % 87 124 213
90 % 123 179 143
70 % 307 644 7
50 % 308 649 7
40 % 322 691 11
30 % 346 807 14
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 283 558 2
95 % 310 601 3
90 % 313 610 4
70 % 372 837 5
50 % 378 857 5
40 % 378 857 9
30 % 378 857 13
Entity #3 | Chains: C
HIV-1 GAG PEPTIDE (GGKKRYKL - 5R MUTATION) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.