Sequence Similarity Clusters for the Entities in PDB 1AGF

Entity #1 | Chains: A
B*0801 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 16 2113
95 % 95 134 218
90 % 136 200 132
70 % 327 688 6
50 % 328 693 6
40 % 349 743 10
30 % 375 861 15
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 305 596 2
95 % 332 640 3
90 % 335 649 4
70 % 397 879 4
50 % 405 901 3
40 % 405 907 9
30 % 405 901 14
Entity #3 | Chains: C
HIV-1 GAG PEPTIDE (GGKKRYKL - 5R MUTATION) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.