Sequence Similarity Clusters for the Entities in PDB 1AGE

Entity #1 | Chains: A
B*0801 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 16 2207
95 % 100 135 227
90 % 145 201 135
70 % 363 727 6
50 % 364 732 6
40 % 387 783 10
30 % 416 907 15
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 336 624 2
95 % 363 668 3
90 % 366 677 4
70 % 435 922 4
50 % 443 944 3
40 % 443 944 7
30 % 443 944 12
Entity #3 | Chains: C
HIV-1 GAG PEPTIDE (GGKKKYRL - 7R MUTATION) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures