Sequence Similarity Clusters for the Entities in PDB 1AGE

Entity #1 | Chains: A
B*0801 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 16 2113
95 % 99 134 218
90 % 144 200 132
70 % 349 692 6
50 % 350 697 6
40 % 373 748 10
30 % 399 868 15
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 325 600 2
95 % 352 644 3
90 % 355 653 4
70 % 421 885 4
50 % 429 907 3
40 % 429 907 9
30 % 429 907 14
Entity #3 | Chains: C
HIV-1 GAG PEPTIDE (GGKKKYRL - 7R MUTATION) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.