Sequence Similarity Clusters for the Entities in PDB 1AGC

Entity #1 | Chains: A
B*0801 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 16 2028
95 % 84 129 218
90 % 121 189 144
70 % 287 664 7
50 % 287 669 7
40 % 301 717 10
30 % 322 834 15
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 268 579 2
95 % 294 622 3
90 % 296 631 4
70 % 347 859 5
50 % 352 879 5
40 % 352 879 9
30 % 352 879 14
Entity #3 | Chains: C
HIV-1 GAG PEPTIDE (GGKKKYQL - 7Q MUTATION) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.