Sequence Similarity Clusters for the Entities in PDB 1AGC

Entity #1 | Chains: A
B*0801 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 16 2113
95 % 87 134 218
90 % 125 200 132
70 % 294 688 6
50 % 294 693 6
40 % 310 743 10
30 % 333 861 15
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 275 596 2
95 % 301 640 3
90 % 303 649 4
70 % 356 879 4
50 % 362 901 3
40 % 362 907 9
30 % 362 901 14
Entity #3 | Chains: C
HIV-1 GAG PEPTIDE (GGKKKYQL - 7Q MUTATION) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.