Sequence Similarity Clusters for the Entities in PDB 1AGB

Entity #1 | Chains: A
B*0801 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 16 2164
95 % 101 134 224
90 % 147 200 133
70 % 366 716 6
50 % 367 721 6
40 % 390 772 10
30 % 419 896 15
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 339 616 2
95 % 366 660 3
90 % 369 669 4
70 % 440 912 4
50 % 448 934 3
40 % 448 934 7
30 % 448 934 12
Entity #3 | Chains: C
HIV-1 GAG PEPTIDE (GGRKKYKL - 3R MUTATION) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.