Sequence Similarity Clusters for the Entities in PDB 1AGB

Entity #1 | Chains: A
B*0801 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 16 2113
95 % 101 134 218
90 % 147 200 132
70 % 357 692 6
50 % 358 697 6
40 % 381 748 10
30 % 407 868 15
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 331 600 2
95 % 358 644 3
90 % 361 653 4
70 % 429 885 4
50 % 437 907 3
40 % 437 907 9
30 % 437 907 14
Entity #3 | Chains: C
HIV-1 GAG PEPTIDE (GGRKKYKL - 3R MUTATION) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.