Sequence Similarity Clusters for the Entities in PDB 1AGB

Entity #1 | Chains: A
B*0801 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 16 2039
95 % 98 129 219
90 % 143 189 144
70 % 350 666 7
50 % 351 671 7
40 % 373 721 10
30 % 397 838 15
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 324 579 2
95 % 351 622 3
90 % 354 631 4
70 % 420 859 5
50 % 428 881 5
40 % 428 881 9
30 % 428 881 14
Entity #3 | Chains: C
HIV-1 GAG PEPTIDE (GGRKKYKL - 3R MUTATION) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.