Sequence Similarity Clusters for the Entities in PDB 1AFS

Entity #1 | Chains: A,B
3-ALPHA-HYDROXYSTEROID DEHYDROGENASE protein, length: 323 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16869
95 % 1 3 15659 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.6
PDBFlex
90 % 1 3 15326
70 % 72 80 366
50 % 258 272 130
40 % 296 319 114
30 % 330 365 95

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures