Sequence Similarity Clusters for the Entities in PDB 1AFQ

Entity #1 | Chains: A
BOVINE GAMMA-CHYMOTRYPSIN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
BOVINE GAMMA-CHYMOTRYPSIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 38 783
95 % 12 38 1076
90 % 12 38 1098
70 % 12 40 1092
50 % 12 40 1132
40 % 12 42 1101
30 % 13 50 940
Entity #3 | Chains: C
BOVINE GAMMA-CHYMOTRYPSIN protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 38 785
95 % 12 38 1079
90 % 12 38 1101
70 % 12 40 1096
50 % 12 43 1061
40 % 13 52 938
30 % 13 52 914

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.