Sequence Similarity Clusters for the Entities in PDB 1AFO

Entity #1 | Chains: A,B
GLYCOPHORIN A protein, length: 40 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 25554
95 % 2 2 21760
90 % 2 2 21124
70 % 2 2 19385
50 % 2 2 16821
40 % 2 2 14989
30 % 2 2 12837

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures