Sequence Similarity Clusters for the Entities in PDB 1AFI

Entity #1 | Chains: A
MERP protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 16717
95 % 3 4 15512
90 % 3 4 15189
70 % 3 4 14223
50 % 3 4 12561
40 % 12 13 4016
30 % 49 50 1133

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures