Sequence Similarity Clusters for the Entities in PDB 1AFD

Entity #1 | Chains: 1,2,3
MANNOSE-BINDING PROTEIN-A protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 7050
95 % 6 7 2842 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 19 21 734
70 % 19 21 782
50 % 19 22 814
40 % 43 55 315
30 % 50 65 263

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.