Sequence Similarity Clusters for the Entities in PDB 1AFB

Entity #1 | Chains: 1,2,3
MANNOSE-BINDING PROTEIN-A protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 8091
95 % 2 7 3045 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.7
PDBFlex
90 % 6 21 778
70 % 6 21 818
50 % 6 22 862
40 % 24 48 349
30 % 119 288 51

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures