Sequence Similarity Clusters for the Entities in PDB 1AFB

Entity #1 | Chains: 1,2,3
MANNOSE-BINDING PROTEIN-A protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 7658
95 % 2 7 3079 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.7
PDBFlex
90 % 6 21 799
70 % 6 21 845
50 % 6 22 875
40 % 23 55 383
30 % 30 65 284

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures