Sequence Similarity Clusters for the Entities in PDB 1AFA

Entity #1 | Chains: 1,2,3
MANNOSE-BINDING PROTEIN-A protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 7092
95 % 4 7 2848 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 16 21 739
70 % 16 21 788
50 % 16 22 816
40 % 40 55 317
30 % 47 65 264

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.