Sequence Similarity Clusters for the Entities in PDB 1AFA

Entity #1 | Chains: 1,2,3
MANNOSE-BINDING PROTEIN-A protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 7356
95 % 4 7 2957 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.7
PDBFlex
90 % 16 21 773
70 % 16 21 820
50 % 16 22 850
40 % 40 55 340
30 % 47 65 274

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.