Sequence Similarity Clusters for the Entities in PDB 1AEF

Entity #1 | Chains: A
CYTOCHROME C PEROXIDASE protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 30 1406
95 % 218 224 129 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.5
PDBFlex
90 % 218 224 134
70 % 218 224 156
50 % 218 224 187
40 % 218 224 201
30 % 218 224 214

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures