Sequence Similarity Clusters for the Entities in PDB 1AED

Entity #1 | Chains: A
CYTOCHROME C PEROXIDASE protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 30 1430
95 % 216 224 133 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.5
PDBFlex
90 % 216 224 137
70 % 216 224 161
50 % 216 224 191
40 % 216 224 204
30 % 216 224 215

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures