Sequence Similarity Clusters for the Entities in PDB 1AE8

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 323 326 40
95 % 324 327 56
90 % 324 327 61
70 % 326 329 67
50 % 326 329 94
40 % 326 329 117
30 % 326 329 130
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 278 281 51
95 % 362 365 20
90 % 369 372 23
70 % 393 396 27
50 % 393 396 57
40 % 1580 1591 4
30 % 1722 1733 6
Entity #3 | Chains: I
HIRUGEN protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.