Sequence Similarity Clusters for the Entities in PDB 1AE6

Entity #1 | Chains: L
IGG CTM01 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 5771
95 % 8 8 6059 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 31 33 1064
70 % 1952 2696 1
50 % 3973 5473 1
40 % 4493 6175 1
30 % 5578 7645 1
Entity #2 | Chains: H
IGG CTM01 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63377
95 % 1 1 51605
90 % 8 9 5888
70 % 1921 2655 2
50 % 3974 5473 1
40 % 4494 6175 1
30 % 5579 7645 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures