Sequence Similarity Clusters for the Entities in PDB 1AE6

Entity #1 | Chains: L
IGG CTM01 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 5462
95 % 8 8 5755 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 31 33 1003
70 % 1849 2538 1
50 % 3762 5152 1
40 % 4259 5806 1
30 % 5326 7240 1
Entity #2 | Chains: H
IGG CTM01 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61064
95 % 1 1 49775
90 % 10 14 3351
70 % 1817 2497 2
50 % 3763 5152 1
40 % 4260 5806 1
30 % 5327 7240 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures