Sequence Similarity Clusters for the Entities in PDB 1AE6

Entity #1 | Chains: L
IGG CTM01 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 5619
95 % 8 8 5905 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 31 33 1025
70 % 1909 2621 1
50 % 3887 5323 1
40 % 4396 6003 1
30 % 5475 7460 1
Entity #2 | Chains: H
IGG CTM01 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62267
95 % 1 1 50695
90 % 14 18 2660
70 % 1878 2580 2
50 % 3888 5323 1
40 % 4397 6003 1
30 % 5476 7460 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures