Sequence Similarity Clusters for the Entities in PDB 1AE6

Entity #1 | Chains: L
IGG CTM01 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60063
95 % 10 12 3747 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 31 33 961
70 % 1704 2327 1
50 % 3457 4713 1
40 % 3457 4713 1
30 % 4095 5567 1
Entity #2 | Chains: H
IGG CTM01 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60173
95 % 1 1 42258
90 % 2 2 22321
70 % 1668 2280 2
50 % 3458 4713 1
40 % 3458 4713 1
30 % 4096 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.