Sequence Similarity Clusters for the Entities in PDB 1AE6

Entity #1 | Chains: L
IGG CTM01 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60902
95 % 10 12 3809 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 31 33 980
70 % 1758 2392 1
50 % 3565 4843 1
40 % 3565 4843 1
30 % 4210 5705 1
Entity #2 | Chains: H
IGG CTM01 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61015
95 % 1 1 42833
90 % 2 2 22640
70 % 1719 2342 2
50 % 3566 4843 1
40 % 3566 4843 1
30 % 4211 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures