Sequence Similarity Clusters for the Entities in PDB 1ADQ

Entity #1 | Chains: A
IGG4 REA FC protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63400
95 % 141 164 114 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.4
PDBFlex
90 % 148 173 97
70 % 149 174 108
50 % 160 185 139
40 % 160 185 152
30 % 4946 5951 1
Entity #2 | Chains: L
IGM-LAMBDA RF-AN FAB (LIGHT CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62914
95 % 17 19 1232 Flexibility: Medium
Max RMSD: 9.9, Avg RMSD: 3.6
PDBFlex
90 % 56 67 345
70 % 2046 2479 1
50 % 4151 5021 1
40 % 4151 5021 1
30 % 4947 5951 1
Entity #3 | Chains: H
IGM-LAMBDA RF-AN FAB (HEAVY CHAIN) protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61684
95 % 1 1 43341
90 % 1 1 41289
70 % 9 9 4541
50 % 4152 5021 1
40 % 4152 5021 1
30 % 4948 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures