Sequence Similarity Clusters for the Entities in PDB 1ADQ

Entity #1 | Chains: A
IGG4 REA FC protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61336
95 % 138 160 92 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.4
PDBFlex
90 % 145 169 88
70 % 146 170 104
50 % 155 179 138
40 % 155 179 151
30 % 4623 5571 1
Entity #2 | Chains: L
IGM-LAMBDA RF-AN FAB (LIGHT CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60868
95 % 16 18 1202 Flexibility: Medium
Max RMSD: 9.9, Avg RMSD: 3.6
PDBFlex
90 % 52 63 349
70 % 1923 2329 1
50 % 3901 4717 1
40 % 3901 4717 1
30 % 4624 5571 1
Entity #3 | Chains: H
IGM-LAMBDA RF-AN FAB (HEAVY CHAIN) protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59686
95 % 1 1 41992
90 % 1 1 40060
70 % 9 9 4380
50 % 3902 4717 1
40 % 3902 4717 1
30 % 4625 5571 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.