Sequence Similarity Clusters for the Entities in PDB 1AD9

Entity #1 | Chains: A,L
IGG CTM01 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36556
95 % 1 1 31132 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 29826
70 % 1833 2516 1
50 % 3725 5101 1
40 % 4217 5750 1
30 % 5266 7168 1
Entity #2 | Chains: B,H
IGG CTM01 FAB (HEAVY CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36557
95 % 1 1 31133 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 29827
70 % 1801 2475 2
50 % 3726 5101 1
40 % 4218 5750 1
30 % 5267 7168 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures