Sequence Similarity Clusters for the Entities in PDB 1AD9

Entity #1 | Chains: A,L
IGG CTM01 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39398
95 % 1 1 30146 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 28997
70 % 1659 2264 1
50 % 3368 4587 1
40 % 3368 4587 1
30 % 3961 5392 1
Entity #2 | Chains: B,H
IGG CTM01 FAB (HEAVY CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39399
95 % 1 1 30147 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 28998
70 % 1628 2222 2
50 % 3369 4587 1
40 % 3369 4587 1
30 % 3962 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.