Sequence Similarity Clusters for the Entities in PDB 1AD0

Entity #1 | Chains: A,C
ANTIBODY A5B7 (LIGHT CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35895
95 % 1 1 30619 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 405 780 2
70 % 1310 2553 1
50 % 2684 5180 1
40 % 3070 5834 1
30 % 3771 7269 1
Entity #2 | Chains: B,D
ANTIBODY A5B7 (HEAVY CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35897
95 % 1 1 30621 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 29364
70 % 1302 2511 2
50 % 2685 5180 1
40 % 3071 5834 1
30 % 3772 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures