Sequence Similarity Clusters for the Entities in PDB 1AD0

Entity #1 | Chains: A,C
ANTIBODY A5B7 (LIGHT CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41194
95 % 1 1 31388
90 % 371 729 3
70 % 1212 2362 1
50 % 2477 4781 1
40 % 2477 4781 1
30 % 2831 5635 1
Entity #2 | Chains: B,D
ANTIBODY A5B7 (HEAVY CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40448
95 % 1 1 30966 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 29776
70 % 1201 2311 2
50 % 2478 4781 1
40 % 2478 4781 1
30 % 2832 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures