Sequence Similarity Clusters for the Entities in PDB 1AD0

Entity #1 | Chains: A,C
ANTIBODY A5B7 (LIGHT CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 35654
95 % 1 1 30425
90 % 397 762 2
70 % 1296 2519 1
50 % 2651 5107 1
40 % 3034 5756 1
30 % 3725 7175 1
Entity #2 | Chains: B,D
ANTIBODY A5B7 (HEAVY CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35656
95 % 1 1 30427 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 29189
70 % 1288 2478 2
50 % 2652 5107 1
40 % 3035 5756 1
30 % 3726 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures