Sequence Similarity Clusters for the Entities in PDB 1ACY

Entity #1 | Chains: L
IGG1-KAPPA 59.1 FAB (LIGHT CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 38936
95 % 28 39 741
90 % 56 83 247
70 % 1364 1803 2
50 % 3311 4435 1
40 % 3311 4435 1
30 % 3898 5225 1
Entity #2 | Chains: H
IGG1-KAPPA 59.1 FAB (HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 38370
95 % 2 2 29394
90 % 2 2 28308
70 % 1599 2145 1
50 % 3312 4435 1
40 % 3312 4435 1
30 % 3899 5225 1
Entity #3 | Chains: P
HIV-1 GP120 (MN ISOLATE) protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 9527
95 % 6 6 9577
90 % 6 6 9460
70 % 15 15 2875
50 % 15 15 2830
40 % 15 15 2802
30 % 15 15 2620

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.