Sequence Similarity Clusters for the Entities in PDB 1ABY

Entity #1 | Chains: A
HEMOGLOBIN protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 20487
95 % 9 9 7977 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 9 9 7917
70 % 9 9 7691
50 % 9 9 7087
40 % 9 9 6581
30 % 9 9 5886
Entity #2 | Chains: B,D
HEMOGLOBIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 6897
95 % 198 250 19 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 202 255 19
70 % 256 346 14
50 % 567 754 4
40 % 572 759 8
30 % 1019 1226 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures