Sequence Similarity Clusters for the Entities in PDB 1ABY

Entity #1 | Chains: A
HEMOGLOBIN protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 19691
95 % 9 9 7693 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 9 9 7640
70 % 9 9 7435
50 % 9 9 6846
40 % 9 9 6362
30 % 9 9 5693
Entity #2 | Chains: B,D
HEMOGLOBIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 6650
95 % 193 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 197 250 19
70 % 252 341 12
50 % 559 744 4
40 % 564 749 8
30 % 993 1198 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.