Sequence Similarity Clusters for the Entities in PDB 1ABY

Entity #1 | Chains: A
HEMOGLOBIN protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 18905
95 % 9 9 7356 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 9 9 7315
70 % 9 9 7117
50 % 9 9 6574
40 % 9 9 6120
30 % 9 9 5481
Entity #2 | Chains: B,D
HEMOGLOBIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 6370
95 % 192 239 33 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 196 244 31
70 % 250 335 14
50 % 553 730 5
40 % 558 735 9
30 % 978 1175 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.