Sequence Similarity Clusters for the Entities in PDB 1ABY

Entity #1 | Chains: A
HEMOGLOBIN protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 20025
95 % 9 9 7809 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 9 9 7755
70 % 9 9 7537
50 % 9 9 6944
40 % 9 9 6455
30 % 9 9 5771
Entity #2 | Chains: B,D
HEMOGLOBIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 6759
95 % 198 250 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 202 255 19
70 % 256 346 11
50 % 567 754 4
40 % 572 759 8
30 % 1007 1214 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures