Sequence Similarity Clusters for the Entities in PDB 1ABJ

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 223 329 44
95 % 223 330 60
90 % 223 330 65
70 % 223 332 76
50 % 223 332 101
40 % 223 332 125
30 % 223 332 136
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 197 284 55
95 % 247 368 37
90 % 249 375 38
70 % 251 399 44
50 % 251 399 78
40 % 1162 1623 4
30 % 1255 1765 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.