Sequence Similarity Clusters for the Entities in PDB 1ABJ

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 222 328 43
95 % 222 329 58
90 % 222 329 63
70 % 222 331 74
50 % 222 331 100
40 % 222 331 124
30 % 222 331 135
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 196 283 53
95 % 246 367 35
90 % 248 374 36
70 % 250 398 41
50 % 250 398 75
40 % 1158 1617 4
30 % 1251 1759 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.