Sequence Similarity Clusters for the Entities in PDB 1AB9

Entity #1 | Chains: A
GAMMA-CHYMOTRYPSIN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
GAMMA-CHYMOTRYPSIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 38 755
95 % 8 38 1044
90 % 8 38 1063
70 % 8 40 1062
50 % 8 40 1105
40 % 8 42 1080
30 % 8 50 916
Entity #3 | Chains: C
GAMMA-CHYMOTRYPSIN protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 38 756
95 % 8 38 1045
90 % 8 38 1064
70 % 8 40 1067
50 % 8 43 1029
40 % 8 52 898
30 % 8 52 885
Entity #4 | Chains: D
PENTAPEPTIDE (TPGVY) protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.