Sequence Similarity Clusters for the Entities in PDB 1AB9

Entity #1 | Chains: A
GAMMA-CHYMOTRYPSIN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
GAMMA-CHYMOTRYPSIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 38 815
95 % 8 38 1113
90 % 8 38 1136
70 % 8 40 1131
50 % 8 40 1174
40 % 8 42 1139
30 % 8 50 972
Entity #3 | Chains: C
GAMMA-CHYMOTRYPSIN protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 38 816
95 % 8 38 1114
90 % 8 38 1138
70 % 8 40 1134
50 % 8 43 1105
40 % 8 52 975
30 % 8 52 946
Entity #4 | Chains: D
PENTAPEPTIDE (TPGVY) protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.