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ZIF268 ZINC FINGER-DNA COMPLEX
Sequence Clustering and Redundancy Reduction Results
1AAY
Sequence Clusters for the Sequence Entities in PDB 1AAY
Entity #1: Chains: B - DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3') dna, length: 11 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: C - DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3') dna, length: 11 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A - PROTEIN (ZIF268 ZINC FINGER PEPTIDE) protein, length: 90 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 7 7159
95% 3 15 3092
90% 3 15 3129
70% 3 17 2374
50% 4 24 1534
40% 4 160 206
30% 4 170 209
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.