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ZIF268 ZINC FINGER-DNA COMPLEX
Sequence Clustering and Redundancy Reduction Results
1AAY
Sequence Clusters for the Sequence Entities in PDB 1AAY
Entity #1: Chains: B - DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3') dna, length: 11 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: C - DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3') dna, length: 11 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A - PROTEIN (ZIF268 ZINC FINGER PEPTIDE) protein, length: 90 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 8 5914
95% 4 16 3079
90% 4 16 3122
70% 4 18 2382
50% 5 25 1616
40% 5 166 224
30% 5 178 224
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.