Sequence Similarity Clusters for the Entities in PDB 1AAT

Entity #1 | Chains: A,B
CYTOSOLIC ASPARTATE AMINOTRANSFERASE protein, length: 411 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 20581
95 % 2 2 18615 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 2 18123
70 % 14 14 2528
50 % 35 35 929
40 % 154 154 206
30 % 155 155 225

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5TOQ 1 A, B Aspartate aminotransferase, cytoplasmic 9823 2.6.1.1 | Details 2.6.1.3 | Details
2 5TOR 1 A, B Aspartate aminotransferase, cytoplasmic 9823 2.6.1.1 | Details 2.6.1.3 | Details
3 5TOT 1 A, B Aspartate aminotransferase, cytoplasmic 9823 2.6.1.1 | Details 2.6.1.3 | Details
4 5TON 1 A, B Aspartate aminotransferase, cytoplasmic 9823 2.6.1.1 | Details 2.6.1.3 | Details
5 1AJS 1 A ASPARTATE AMINOTRANSFERASE THE COENZYME PYRIDOXAL 5'-PHOSPHATE IN SUBUNIT A FORMS A SCHIFF BASE WITH THE SUBSTRATE ANALOG 2-METHYLASPARTATE, AND FORMS THE EXTERNAL ALDIMINE. BUT DUE TO CRYSTAL LATTICE PACKINGS THE COENZYME IN SUBUNIT B IS STILL IN THE INTERNAL ALDIMINE WITH THE SIDE CHAIN OF LYS 258. 9823 2.6.1.1 | Details 2.6.1.3 | Details
6 1AJS 2 B ASPARTATE AMINOTRANSFERASE THE COENZYME PYRIDOXAL 5'-PHOSPHATE IN SUBUNIT A FORMS A SCHIFF BASE WITH THE SUBSTRATE ANALOG 2-METHYLASPARTATE, AND FORMS THE EXTERNAL ALDIMINE. BUT DUE TO CRYSTAL LATTICE PACKINGS THE COENZYME IN SUBUNIT B IS STILL IN THE INTERNAL ALDIMINE WITH THE SIDE CHAIN OF LYS 258. 9823 2.6.1.1 | Details 2.6.1.3 | Details
7 1AJR 1 A, B ASPARTATE AMINOTRANSFERASE LYS258 SIDE CHAIN FORMS THE SCHIFF BASE WITH COENZYME PYRIDOXAL 5'-PHOSPHATE 9823 2.6.1.1 | Details 2.6.1.3 | Details
8 2CST 1 A, B ASPARTATE AMINOTRANSFERASE 9031 2.6.1.1 | Details 2.6.1.3 | Details
9 5VK7 1 A, B Aspartate aminotransferase, cytoplasmic 9823 2.6.1.1 | Details 2.6.1.3 | Details
10 3II0 1 A, B, C, D Aspartate aminotransferase, cytoplasmic UNP residues 14-412 9606 2.6.1.1 | Details 2.6.1.3 | Details
11 5VJZ 1 A Aspartate aminotransferase, cytoplasmic 9823 2.6.1.1 | Details 2.6.1.3 | Details
12 5VJZ 2 B Aspartate aminotransferase, cytoplasmic 9823 2.6.1.1 | Details 2.6.1.3 | Details
13 3WZF 1 A Aspartate aminotransferase, cytoplasmic 9606 2.6.1.1 | Details 2.6.1.3 | Details
14 1AAT 1 A, B CYTOSOLIC ASPARTATE AMINOTRANSFERASE 9031 2.6.1.1 | Details 2.6.1.3 | Details