Sequence Similarity Clusters for the Entities in PDB 1AA1

Entity #1 | Chains: B,E,H,L
RIBULOSE BISPHOSPHATE CARBOXYLASE (LARGE CHAIN) protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 1230
95 % 5 10 964
90 % 23 34 164
70 % 26 41 162
50 % 30 48 172
40 % 33 57 144
30 % 48 87 115
Entity #2 | Chains: C,F,I,S
RIBULOSE BISPHOSPHATE CARBOXYLASE (SMALL CHAIN) protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 9 785
95 % 4 9 1074
90 % 5 10 1010
70 % 12 20 613
50 % 22 33 232
40 % 25 38 218
30 % 25 38 228

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.