Sequence Similarity Clusters for the Entities in PDB 1A9W

Entity #1 | Chains: A,C
HEMOGLOBIN (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 185 222 22
95 % 211 250 19
90 % 212 251 20
70 % 267 332 14
50 % 627 754 4
40 % 632 759 8
30 % 1069 1214 8
Entity #2 | Chains: E,F
HEMOGLOBIN (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44880
95 % 1 1 33830
90 % 1 1 32329
70 % 285 346 11
50 % 628 754 4
40 % 633 759 8
30 % 1070 1214 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures