Sequence Similarity Clusters for the Entities in PDB 1A9M

Entity #1 | Chains: A,B
HIV-1 PROTEASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15563
95 % 356 411 4 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 576 659 3
70 % 597 683 5
50 % 612 709 5
40 % 622 719 8
30 % 624 721 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures