Sequence Similarity Clusters for the Entities in PDB 1A9B

Entity #1 | Chains: A,D
HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-35 B*3501 (ALPHA CHAIN) protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 25 1433
95 % 133 134 218
90 % 198 200 132
70 % 681 692 6
50 % 683 697 6
40 % 732 748 10
30 % 848 868 15
Entity #2 | Chains: B,E
BETA-2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 582 600 2
95 % 625 644 3
90 % 634 653 4
70 % 863 885 4
50 % 884 907 3
40 % 884 907 9
30 % 884 907 14
Entity #3 | Chains: C,F
PEPTIDE LPPLDITPY protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.