Sequence Similarity Clusters for the Entities in PDB 1A8O

Entity #1 | Chains: A
HIV CAPSID protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 72119
95 % 2 24 241 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.2
PDBFlex
90 % 2 24 256
70 % 2 24 288
50 % 2 24 323
40 % 2 25 335
30 % 2 25 344

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.