Sequence Similarity Clusters for the Entities in PDB 1A8M

Entity #1 | Chains: A,B,C
TUMOR NECROSIS FACTOR ALPHA protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21649
95 % 5 17 354 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 5 17 377
70 % 6 18 408
50 % 6 18 481
40 % 6 18 518
30 % 11 30 406

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.