Sequence Similarity Clusters for the Entities in PDB 1A8M

Entity #1 | Chains: A,B,C
TUMOR NECROSIS FACTOR ALPHA protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22300
95 % 9 21 325 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 9 21 344
70 % 10 22 369
50 % 10 22 436
40 % 10 22 467
30 % 15 34 359

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.