Sequence Similarity Clusters for the Entities in PDB 1A8M

Entity #1 | Chains: A,B,C
TUMOR NECROSIS FACTOR ALPHA protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21907
95 % 6 18 352 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 6 18 377
70 % 7 19 410
50 % 7 19 484
40 % 7 19 519
30 % 12 31 414

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.