Sequence Similarity Clusters for the Entities in PDB 1A8J

Entity #1 | Chains: H,L
IMMUNOGLOBULIN LAMBDA LIGHT CHAIN DIMER (MCG) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 18 1175
95 % 17 20 1422 Flexibility: Medium
Max RMSD: 14.5, Avg RMSD: 7.2
PDBFlex
90 % 60 86 243
70 % 1552 2385 1
50 % 3147 4827 1
40 % 3147 4827 1
30 % 3674 5688 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures