Sequence Similarity Clusters for the Entities in PDB 1A8J

Entity #1 | Chains: H,L
IMMUNOGLOBULIN LAMBDA LIGHT CHAIN DIMER (MCG) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 18 1169
95 % 17 20 1418 Flexibility: Medium
Max RMSD: 14.5, Avg RMSD: 7.2
PDBFlex
90 % 60 86 241
70 % 1537 2362 1
50 % 3117 4781 1
40 % 3117 4781 1
30 % 3637 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures