Sequence Similarity Clusters for the Entities in PDB 1A88

Entity #1 | Chains: A,B,C
CHLOROPEROXIDASE L protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27140
95 % 1 1 22730 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 1 22067
70 % 1 1 20252
50 % 7 11 1221
40 % 13 18 968
30 % 18 24 857

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures