Sequence Similarity Clusters for the Entities in PDB 1A85

Entity #1 | Chains: A
MMP-8 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 24 1538
95 % 24 25 2009 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 24 25 2055
70 % 24 25 2063
50 % 226 232 103
40 % 230 236 125
30 % 230 236 132

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures