Sequence Similarity Clusters for the Entities in PDB 1A81

Entity #1 | Chains: A,C,E,G,I,K
SYK KINASE protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 13084
95 % 1 1 12616 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 1 1 12436
70 % 1 1 11737
50 % 5 5 6487
40 % 5 5 6054
30 % 5 5 5424
Entity #2 | Chains: B,D,F,H,J,L
T-CELL SURFACE GLYCOPROTEIN CD3 EPSILON CHAIN protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures