Sequence Similarity Clusters for the Entities in PDB 1A81

Entity #1 | Chains: A,C,E,G,I,K
SYK KINASE protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 12599
95 % 1 1 12183 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 1 1 12013
70 % 1 1 11348
50 % 5 5 6275
40 % 5 5 5861
30 % 5 5 5244
Entity #2 | Chains: B,D,F,H,J,L
T-CELL SURFACE GLYCOPROTEIN CD3 EPSILON CHAIN protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.