Sequence Similarity Clusters for the Entities in PDB 1A81

Entity #1 | Chains: A,C,E,G,I,K
SYK KINASE protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 12863
95 % 1 1 12409 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 1 1 12234
70 % 1 1 11560
50 % 5 5 6389
40 % 5 5 5965
30 % 5 5 5338
Entity #2 | Chains: B,D,F,H,J,L
T-CELL SURFACE GLYCOPROTEIN CD3 EPSILON CHAIN protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures