Sequence Similarity Clusters for the Entities in PDB 1A7W

Entity #1 | Chains: A
HISTONE HMFB protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 7880
95 % 1 4 7928 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 1 4 7864
70 % 2 6 5651
50 % 2 7 4682
40 % 2 7 4422
30 % 2 7 3984

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1A7W 1 A HISTONE HMFB 2180
2 1B6W 1 A PROTEIN (HISTONE HMFB) THIS IS A SELENOMETHIONINE PROTEIN. RESIDUES 1 AND 35 ARE SEMET (BUT SIDE CHAIN OF RESIDUE 1 IS DISORDERED) 2180
3 5T5K 1 A, B, C, D, E, F DNA-binding protein HMf-2 2180
4 1BFM 1 A, B HISTONE B 2180